MOMD:
Mouse Oral Microbiome Database
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MOMD Genome Explorer
Selected genome:
Shigella flexneri
19428wH2_1568
Change genome:
Available genomes
1. Actinomyces bowdenii WMus004.1
2. Bacteroides acidifaciens 19428wH3_P2318
3. Bacteroides acidifaciens 8_33DSS_C5_S8
4. Citrobacter koseri 19428wH4_BL23
5. Dysgonomonas mossii 19428wE4_P11
6. Enterococcus gallinarum 19428wB3_C2
7. Enterococcus gallinarum ENT.1
8. Escherichia coli 19428wD4_HM13
9. Gemella palaticanis CIP106318T.1
10. Gemella sp. 19428wG2_WT2a
11. Gemella sp. GH3.1
12. Gemella sp. GL1.1
13. Granulicatella sp. 19428wC4_WM01
14. Jeotgalicoccus nanhaiensis 19428wE5_W307
15. Lactobacillus johnsonii 19428wE2_CC3
16. Lactobacillus murinus LAC.1
17. Ligilactobacillus murinus 19428wF2_HT12
18. Ligilactobacillus murinus 2_2BalbC1BO2_S2
19. Mammaliicoccus lentus 19428wC1_HT5
20. Mammaliicoccus lentus 19428wG1_AE2
21. Mammaliicoccus lentus 3_3BalbC2O2_S3
22. Mammaliicoccus sciuri 19428wE1_BL01
23. Mammaliicoccus sciuri ACT.1
24. Microbacterium paludicola 19428wA4_P1012
25. Micrococcus aloeverae 19428wE3_DK2
26. Micrococcus yunnanensis 19428wG4_IOV6
27. Muribacter muris 19428wC3_WT12
28. Muribacter muris 7_18CXCR221ANO_S7
29. Neisseria sp. 19428wB4_WF04
30. Parabacteroides goldsteinii 19428wG3_P14
31. Pasteurella sp. 19428wF3_WM03
32. Proteus mirabilis 19428wB5_irhom_Sw
33. Providencia alcalifaciens WMus003.1
34. Rothia nasimurium 19428wA5_irhom_31
35. Sanguibacter inulinus DSM100099.1
36. Shigella flexneri 19428wH2_1568
37. Staphylococcus arlettae 19428wH1_IOV5
38. Staphylococcus aureus 19428wD1_P36
39. Staphylococcus aureus 4_5BalbC4O2_S4
40. Staphylococcus aureus STF.1
41. Staphylococcus capitis GW2.1
42. Staphylococcus saprophyticus 19428wB1_WM06
43. Staphylococcus warneri 19428wF1_P912
44. Staphylococcus xylosus 19428wA1_WT6
45. Streptococcus acidominimus 19428wB2_HT4
46. Streptococcus acidominimus 6_8CXCR23O2_S6
47. Streptococcus cuniculi 19428wD2_WM131
48. Streptococcus danieliae 1_1BalbC1O2_S1
49. Streptococcus danieliae STR.1
50. Streptococcus sp. 19428wA2_WM07
51. Streptococcus sp. 19428wC2_LYSM12
52. Streptococcus sp. 19428wD3_AN2
from a total of 52 genomes
Available tools:
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PROKKA Annotation
NCBI Annotation
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Genome Info
Taxon Description
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NCBI Genome Annotation:
contigs: 237
bases: 5,139,722 bps
CDS: 5,034
rRNA: 13
tRNA: 87
tmRNA: 1
Total number of protein coding genes annotated/found:
4,833
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Items 21 - 40
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Molecule
PID/GenBank ID *^
Sequences
Size (NA/AA) ^
Range ^
Gene Product Name
SEQF5015|JADGKR010000032.1
MBF0742818.1
Genome Viewer
NA
AA
3516/1172
4020-505
ATP-binding protein
SEQF5015|JADGKR010000032.1
MBF0742819.1
Genome Viewer
NA
AA
378/126
4723-4346
hypothetical protein
SEQF5015|JADGKR010000032.1
MBF0742820.1
Genome Viewer
NA
AA
780/260
5571-4792
HNH endonuclease
SEQF5015|JADGKR010000032.1
MBF0742821.1
Genome Viewer
NA
AA
114/38
5785-5672
DUF4102 domain-containing protein
SEQF5015|JADGKR010000032.1
MBF0742822.1
Genome Viewer
NA
AA
948/316
7105-6158
nucleotidyl transferase AbiEii/AbiGii toxin family protein
SEQF5015|JADGKR010000032.1
MBF0742823.1
Genome Viewer
NA
AA
396/132
7493-7098
type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein
SEQF5015|JADGKR010000032.1
MBF0742824.1
Genome Viewer
NA
AA
834/278
8396-7563
DUF4942 domain-containing protein
SEQF5015|JADGKR010000032.1
MBF0742825.1
Genome Viewer
NA
AA
342/114
8852-8511
toxin
SEQF5015|JADGKR010000032.1
MBF0742826.1
Genome Viewer
NA
AA
336/112
9218-8883
type IV toxin-antitoxin system YeeU family antitoxin
SEQF5015|JADGKR010000032.1
MBF0742827.1
Genome Viewer
NA
AA
474/158
9691-9218
DNA repair protein RadC
SEQF5015|JADGKR010000032.1
MBF0742828.1
Genome Viewer
NA
AA
819/273
10539-9721
DUF945 domain-containing protein
SEQF5015|JADGKR010000032.1
MBF0742829.1
Genome Viewer
NA
AA
954/318
11728-10775
hypothetical protein
SEQF5015|JADGKR010000032.1
MBF0742830.1
Genome Viewer
NA
AA
615/205
12321-12935
inovirus Gp2 family protein
SEQF5015|JADGKR010000032.1
MBF0742831.1
Genome Viewer
NA
AA
219/73
13053-13271
AlpA family phage regulatory protein
SEQF5015|JADGKR010000032.1
MBF0742832.1
Genome Viewer
NA
AA
786/262
14259-13474
hypothetical protein
SEQF5015|JADGKR010000032.1
MBF0742833.1
Genome Viewer
NA
AA
1014/338
15284-14271
50S ribosome-binding GTPase
SEQF5015|JADGKR010000032.1
MBF0742834.1
Genome Viewer
NA
AA
684/228
16006-15323
WYL domain-containing protein
SEQF5015|JADGKR010000032.1
MBF0742835.1
Genome Viewer
NA
AA
978/326
17298-16321
toll/interleukin-1 receptor domain-containing protein
SEQF5015|JADGKR010000032.1
MBF0742836.1
Genome Viewer
NA
AA
1707/569
17512-19218
type I restriction-modification system subunit M
SEQF5015|JADGKR010000032.1
MBF0742837.1
Genome Viewer
NA
AA
1335/445
19208-20542
restriction endonuclease subunit S
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* Click GI,UID,Gene Product to go to NCBI record
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Copyright 2020 Forsyth Institute
Page last updated: July 7, 2021 08:39:35
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